Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit beta | SAMN04487832_11087 | Not Available | + | 2430843 - 2431949 | 40732.9 |
| hypothetical protein | SAMN04487832_11088 | Not Available | + | 2431972 - 2432352 | 14564.9 |
| ribosome-associated protein | SAMN04487832_11089 | Not Available | + | 2432371 - 2432586 | 7648.37 |
| dna replication and repair protein recf | SAMN04487832_11090 | Not Available | + | 2432583 - 2433731 | 43150.0 |
| protein of unknown function | SAMN04487832_11091 | Not Available | + | 2433697 - 2433975 | 10749.9 |
| hypothetical protein | SAMN04487832_11092 | Not Available | + | 2433981 - 2434436 | 17705.4 |
| dna gyrase subunit b | SAMN04487832_11093 | Not Available | + | 2434875 - 2436842 | 73705.6 |
| hypothetical protein | SAMN04487832_11094 | Not Available | + | 2436852 - 2437406 | 21171.3 |
| dna gyrase subunit a | SAMN04487832_11095 | Not Available | + | 2437443 - 2440109 | 99758.1 |
| hypothetical protein | SAMN04487832_11096 | Not Available | + | 2440394 - 2441200 | 30628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.