Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein, parb family | SAMN04487832_11077 | Not Available | - | 2420146 - 2420958 | 30523.1 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN04487832_11078 | Not Available | - | 2421090 - 2421794 | 26798.4 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04487832_11079 | Not Available | - | 2421798 - 2423672 | 69311.5 |
| trna modification gtpase | SAMN04487832_11080 | Not Available | - | 2423707 - 2425068 | 49276.5 |
| spoiiij-associated protein | SAMN04487832_11081 | Not Available | - | 2425148 - 2426281 | 41516.6 |
| yidc/oxa1 family membrane protein insertase | SAMN04487832_11082 | Not Available | - | 2426302 - 2427444 | 43633.4 |
| hypothetical protein | SAMN04487832_11083 | Not Available | - | 2427441 - 2427749 | 11981.5 |
| ribonuclease p protein component | SAMN04487832_11084 | Not Available | - | 2427746 - 2428114 | 14366.7 |
| large subunit ribosomal protein l34 | SAMN04487832_11085 | Not Available | - | 2428196 - 2428330 | 5374.84 |
| chromosomal replication initiator protein | SAMN04487832_11086 | Not Available | + | 2428956 - 2430332 | 51491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.