Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN04487832_11067 | Not Available | + | 2407692 - 2409515 | 66832.5 |
| muts domain v | SAMN04487832_11068 | Not Available | + | 2409541 - 2411259 | 64776.8 |
| two-component system, response regulator, stage 0 sporulation protein a | SAMN04487832_11069 | Not Available | + | 2411428 - 2412183 | 27915.6 |
| trna(ile)-lysidine synthase tils/mesj | SAMN04487832_11070 | Not Available | + | 2412220 - 2413107 | 33840.9 |
| thioredoxin | SAMN04487832_11071 | Not Available | - | 2413991 - 2414323 | 12208.8 |
| ferredoxin thioredoxin reductase catalytic beta chain | SAMN04487832_11072 | Not Available | - | 2414320 - 2414553 | 8865.74 |
| flavorubredoxin | SAMN04487832_11073 | Not Available | - | 2414882 - 2416042 | 43435.8 |
| seryl-trna synthetase | SAMN04487832_11074 | Not Available | - | 2416996 - 2418288 | 49216.4 |
| chromosome partitioning protein, parb family | SAMN04487832_11075 | Not Available | - | 2418301 - 2419149 | 31360.7 |
| chromosome partitioning protein | SAMN04487832_11076 | Not Available | - | 2419182 - 2419997 | 29720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.