Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN04487832_11057 | Not Available | + | 2394995 - 2395450 | 17543.1 |
| ca2+-transporting atpase | SAMN04487832_11058 | Not Available | - | 2395738 - 2398368 | 93870.9 |
| hypothetical protein | SAMN04487832_11059 | Not Available | + | 2398557 - 2400131 | 56731.9 |
| Trna-thr | Not Available | Not Available | + | 2400463 - 2400538 | Not Available |
| ferrous iron transport protein b | SAMN04487832_11061 | Not Available | + | 2400710 - 2403058 | 85734.5 |
| virus attachment protein p12 family protein | SAMN04487832_11062 | Not Available | + | 2403058 - 2403192 | 4629.93 |
| hypothetical protein | SAMN04487832_11063 | Not Available | - | 2403529 - 2403966 | 16794.2 |
| sensor histidine kinase yesm | SAMN04487832_11064 | Not Available | - | 2404313 - 2405608 | 50092.6 |
| two component transcriptional regulator, lyttr family | SAMN04487832_11065 | Not Available | - | 2405614 - 2406324 | 27784.4 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04487832_11066 | Not Available | - | 2406612 - 2407394 | 28673.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.