Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | SAMN04487832_10181 | Not Available | + | 102279 - 103346 | 39799.2 |
| hypothetical protein | SAMN04487832_10182 | Not Available | + | 103370 - 104431 | 40411.7 |
| lysm domain-containing protein | SAMN04487832_10183 | Not Available | + | 104878 - 106434 | 56430.7 |
| stage iv sporulation protein a | SAMN04487832_10184 | Not Available | + | 106452 - 107927 | 54404.6 |
| glycosidase | SAMN04487832_10185 | Not Available | - | 108178 - 109773 | 61088.1 |
| hd domain-containing protein | SAMN04487832_10186 | Not Available | - | 109824 - 110420 | 22632.9 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04487832_10187 | Not Available | - | 110670 - 111527 | 30643.6 |
| aminotransferase | SAMN04487832_10188 | Not Available | - | 111517 - 112704 | 44058.5 |
| dna-binding transcriptional regulator, lrp family | SAMN04487832_10189 | Not Available | - | 112707 - 113186 | 17532.0 |
| histidinol-phosphatase (php family) | SAMN04487832_10190 | Not Available | - | 113215 - 114066 | 32257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.