Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11017 | Not Available | - | 2361400 - 2361819 | 15558.2 |
| hypothetical protein | SAMN04487832_11018 | Not Available | - | 2362028 - 2363803 | 66361.2 |
| dna-methyltransferase (dcm) | SAMN04487832_11019 | Not Available | + | 2366040 - 2366624 | 21884.1 |
| hypothetical protein | SAMN04487832_11020 | Not Available | + | 2366767 - 2367096 | 12687.0 |
| giy-yig catalytic domain-containing protein | SAMN04487832_11021 | Not Available | - | 2367112 - 2368029 | 34757.5 |
| dna (cytosine-5)-methyltransferase 1 | SAMN04487832_11022 | Not Available | + | 2368304 - 2369284 | 38054.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487832_11023 | Not Available | + | 2369300 - 2369671 | 13787.2 |
| hypothetical protein | SAMN04487832_11024 | Not Available | + | 2369854 - 2371218 | 52371.4 |
| Trna-ser | Not Available | Not Available | + | 2371298 - 2371392 | Not Available |
| Trna-his | Not Available | Not Available | + | 2371490 - 2371563 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.