Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_1107 | Not Available | - | 2354537 - 2355058 | 19716.6 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04487832_1108 | Not Available | - | 2355208 - 2356191 | 35038.8 |
| uridine kinase | SAMN04487832_1109 | Not Available | + | 2356581 - 2357498 | 35209.1 |
| l-amino acid n-acyltransferase ynca | SAMN04487832_11010 | Not Available | - | 2357552 - 2358022 | 17958.4 |
| Trna-met | Not Available | Not Available | + | 2358229 - 2358305 | Not Available |
| Trna-glu | Not Available | Not Available | + | 2358311 - 2358382 | Not Available |
| site-specific recombinase xerd | SAMN04487832_11013 | Not Available | - | 2358505 - 2359698 | 45868.9 |
| dna binding domain-containing protein, excisionase family | SAMN04487832_11014 | Not Available | - | 2359802 - 2359993 | 7299.01 |
| hypothetical protein | SAMN04487832_11015 | Not Available | - | 2360115 - 2360393 | 10548.6 |
| ribbon-helix-helix protein, copg family | SAMN04487832_11016 | Not Available | - | 2360979 - 2361407 | 16089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.