Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4097 and duf4098 domain-containing protein yvlb | SAMN04487832_109128 | Not Available | + | 2336672 - 2337616 | 33239.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_109129 | Not Available | + | 2337765 - 2338832 | 40498.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_109130 | Not Available | + | 2338854 - 2339813 | 35739.0 |
| Trna-met | Not Available | Not Available | + | 2340171 - 2340247 | Not Available |
| uncharacterized conserved protein, contains hepn domain | SAMN04487832_109132 | Not Available | - | 2341215 - 2341559 | 13171.1 |
| hypothetical protein | SAMN04487832_109133 | Not Available | - | 2341549 - 2341830 | 10311.5 |
| plasmid maintenance system antidote protein vapi, contains xre-type hth domain | SAMN04487832_109134 | Not Available | - | 2341897 - 2342277 | 14680.4 |
| hypothetical protein | SAMN04487832_109135 | Not Available | + | 2342526 - 2343170 | 24904.9 |
| hypothetical protein | SAMN04487832_109136 | Not Available | + | 2343205 - 2343669 | 18361.7 |
| hypothetical protein | SAMN04487832_109137 | Not Available | + | 2343810 - 2344124 | 12436.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.