Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_109118 | Not Available | + | 2322216 - 2322578 | 13857.4 |
| signal peptidase i | SAMN04487832_109119 | Not Available | + | 2322604 - 2323203 | 21851.6 |
| fibro-slime domain-containing protein | SAMN04487832_109120 | Not Available | + | 2323200 - 2328122 | 184714.0 |
| lpxtg-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation d2 domain-containing protein | SAMN04487832_109121 | Not Available | + | 2328198 - 2330171 | 70001.9 |
| sortase a | SAMN04487832_109122 | Not Available | + | 2330265 - 2331110 | 31720.4 |
| hypothetical protein | SAMN04487832_109123 | Not Available | + | 2331297 - 2333186 | 70149.8 |
| hypothetical protein | SAMN04487832_109124 | Not Available | + | 2333186 - 2333947 | 28389.5 |
| gtpase, g3e family | SAMN04487832_109125 | Not Available | + | 2333940 - 2334911 | 36636.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_109126 | Not Available | + | 2335211 - 2335705 | 19297.8 |
| putative zinc-finger | SAMN04487832_109127 | Not Available | + | 2335695 - 2336675 | 35394.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.