Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN04487832_109108 | Not Available | - | 2312832 - 2313560 | 26727.1 |
| hlyd family secretion protein | SAMN04487832_109109 | Not Available | - | 2313563 - 2315017 | 52066.7 |
| protein of unknown function | SAMN04487832_109110 | Not Available | - | 2315470 - 2316732 | 46923.8 |
| septum formation protein | SAMN04487832_109111 | Not Available | - | 2316738 - 2317307 | 20560.5 |
| hypothetical protein | SAMN04487832_109112 | Not Available | + | 2317468 - 2318136 | 25914.7 |
| sortase a | SAMN04487832_109113 | Not Available | - | 2318216 - 2318872 | 24310.5 |
| hypothetical protein | SAMN04487832_109114 | Not Available | - | 2318862 - 2319992 | 41569.3 |
| sortase a | SAMN04487832_109115 | Not Available | - | 2319955 - 2320875 | 34670.9 |
| signal peptidase i | SAMN04487832_109116 | Not Available | - | 2320877 - 2321476 | 22253.7 |
| hypothetical protein | SAMN04487832_109117 | Not Available | - | 2321463 - 2321624 | 6236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.