Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | SAMN04487832_10998 | Not Available | - | 2300244 - 2301296 | 37441.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04487832_10999 | Not Available | - | 2301277 - 2302503 | 43440.8 |
| 3-dehydroquinate synthase | SAMN04487832_109100 | Not Available | - | 2302505 - 2303548 | 38023.7 |
| hypothetical protein | SAMN04487832_109101 | Not Available | + | 2305168 - 2305275 | 3996.77 |
| hypothetical protein | SAMN04487832_109102 | Not Available | + | 2305285 - 2306214 | 35091.6 |
| kef-type k+ transport system, membrane component kefb | SAMN04487832_109103 | Not Available | - | 2306219 - 2307433 | 43722.1 |
| hypothetical protein | SAMN04487832_109104 | Not Available | - | 2307701 - 2309017 | 49611.5 |
| carbohydrate binding domain-containing protein | SAMN04487832_109105 | Not Available | + | 2309280 - 2310719 | 54166.9 |
| flavodoxin, short chain | SAMN04487832_109106 | Not Available | - | 2310800 - 2311222 | 14563.7 |
| putative abc transport system permease protein | SAMN04487832_109107 | Not Available | - | 2311528 - 2312832 | 47558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.