Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04487832_10171 | Not Available | + | 92318 - 93133 | 31013.9 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04487832_10172 | Not Available | + | 93345 - 94406 | 39871.9 |
| oligopeptide transport system substrate-binding protein | SAMN04487832_10173 | Not Available | + | 94548 - 96155 | 60464.2 |
| protein phosphatase 2c | SAMN04487832_10174 | Not Available | - | 96463 - 97227 | 28037.5 |
| tatd dnase family protein | SAMN04487832_10175 | Not Available | - | 97247 - 98026 | 29376.2 |
| transcriptional attenuator, lytr family | SAMN04487832_10176 | Not Available | - | 98023 - 98910 | 32025.2 |
| protein of unknown function | SAMN04487832_10177 | Not Available | - | 99219 - 99911 | 25780.6 |
| alanine racemase | SAMN04487832_10178 | Not Available | + | 100057 - 101187 | 41585.9 |
| radical sam enzyme, tigr04100 family | SAMN04487832_10179 | Not Available | + | 101333 - 101944 | 22810.3 |
| hypothetical protein | SAMN04487832_10180 | Not Available | + | 102090 - 102218 | 4417.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.