Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpc | SAMN04487832_10948 | Not Available | + | 2250516 - 2252867 | 86198.7 |
| predicted phospholipase, patatin/cpla2 family | SAMN04487832_10949 | Not Available | + | 2253283 - 2254146 | 32406.8 |
| kynurenine formamidase | SAMN04487832_10950 | Not Available | + | 2254173 - 2254754 | 20786.9 |
| nicotinamide mononucleotide transporter pnuc | SAMN04487832_10951 | Not Available | + | 2254900 - 2255598 | 26345.5 |
| hypothetical protein | SAMN04487832_10952 | Not Available | + | 2255639 - 2256091 | 16907.5 |
| hypothetical protein | SAMN04487832_10953 | Not Available | - | 2256549 - 2257076 | 19372.4 |
| hypothetical protein | SAMN04487832_10954 | Not Available | - | 2257057 - 2257566 | 18633.7 |
| zinc transport system permease protein | SAMN04487832_10955 | Not Available | - | 2257563 - 2258417 | 30246.4 |
| zinc transport system atp-binding protein | SAMN04487832_10956 | Not Available | - | 2258410 - 2259126 | 26190.7 |
| zinc transport system substrate-binding protein | SAMN04487832_10957 | Not Available | - | 2259126 - 2260100 | 35498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.