Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | SAMN04487832_10938 | Not Available | + | 2241582 - 2242181 | 22238.7 |
| ribosome biogenesis gtpase a | SAMN04487832_10939 | Not Available | + | 2242195 - 2243076 | 32429.7 |
| rnase hii | SAMN04487832_10940 | Not Available | + | 2243079 - 2243708 | 23233.0 |
| putative endonuclease | SAMN04487832_10941 | Not Available | + | 2243701 - 2244078 | 13956.6 |
| threonine synthase | SAMN04487832_10942 | Not Available | + | 2244090 - 2245583 | 54794.9 |
| hypothetical protein | SAMN04487832_10943 | Not Available | + | 2245583 - 2246284 | 27122.2 |
| trigger factor | SAMN04487832_10944 | Not Available | + | 2246490 - 2247794 | 48370.9 |
| atp-dependent clp protease, protease subunit | SAMN04487832_10945 | Not Available | + | 2247875 - 2248465 | 21504.9 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04487832_10946 | Not Available | + | 2248474 - 2249754 | 47051.1 |
| hypothetical protein | SAMN04487832_10947 | Not Available | - | 2249913 - 2250044 | 4655.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.