Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase/nuclease subunit b | SAMN04487832_10928 | Not Available | + | 2227642 - 2230977 | 125873.0 |
| dna helicase/exodeoxyribonuclease v, subunit a | SAMN04487832_10929 | Not Available | + | 2230977 - 2234594 | 135985.0 |
| serine protease do | SAMN04487832_10930 | Not Available | - | 2234666 - 2236048 | 49827.1 |
| uncharacterized protein ynzc, upf0291/duf896 family | SAMN04487832_10931 | Not Available | + | 2236566 - 2236775 | 7870.39 |
| cytidine deaminase | SAMN04487832_10932 | Not Available | + | 2236779 - 2237171 | 13933.5 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487832_10933 | Not Available | + | 2237168 - 2237617 | 17007.4 |
| radical sam family uncharacterized protein | SAMN04487832_10934 | Not Available | + | 2237632 - 2239491 | 70850.9 |
| radical sam-linked protein | SAMN04487832_10935 | Not Available | + | 2239466 - 2240122 | 24937.1 |
| large subunit ribosomal protein l19 | SAMN04487832_10936 | Not Available | + | 2240369 - 2240713 | 12929.9 |
| signal peptidase i | SAMN04487832_10937 | Not Available | + | 2240858 - 2241589 | 27416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.