Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | SAMN04487832_108177 | Not Available | - | 2184973 - 2185503 | 19770.7 |
| surface protein | SAMN04487832_108178 | Not Available | - | 2185537 - 2188740 | 116469.0 |
| transposase | SAMN04487832_108179 | Not Available | + | 2188849 - 2189082 | 9167.99 |
| hypothetical protein | SAMN04487832_1091 | Not Available | + | 2189083 - 2190631 | 54960.4 |
| hypothetical protein | SAMN04487832_1092 | Not Available | + | 2190755 - 2190925 | 6521.66 |
| site-specific dna recombinase | SAMN04487832_1093 | Not Available | + | 2190928 - 2192433 | 57172.2 |
| enterochelin esterase | SAMN04487832_1094 | Not Available | - | 2192500 - 2194146 | 60931.6 |
| hypothetical protein | SAMN04487832_1095 | Not Available | - | 2194668 - 2195363 | 25550.9 |
| hexapeptide repeat of succinyl-transferase | SAMN04487832_1096 | Not Available | - | 2195353 - 2195919 | 20398.6 |
| hypothetical protein | SAMN04487832_1097 | Not Available | - | 2195942 - 2196940 | 37145.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.