Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| v/a-type h+-transporting atpase subunit d | SAMN04487832_108167 | Not Available | + | 2168156 - 2168806 | 25090.6 |
| lysyl-trna synthetase, class i | SAMN04487832_108168 | Not Available | + | 2168980 - 2170983 | 76465.0 |
| o-glycosyl hydrolase | SAMN04487832_108169 | Not Available | - | 2171265 - 2174024 | 99853.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487832_108170 | Not Available | - | 2174087 - 2174863 | 28887.6 |
| dna-binding transcriptional regulator, lysr family | SAMN04487832_108171 | Not Available | + | 2175190 - 2176095 | 34625.9 |
| hypothetical protein | SAMN04487832_108172 | Not Available | + | 2176161 - 2177132 | 37353.9 |
| putative abc transport system atp-binding protein | SAMN04487832_108173 | Not Available | + | 2177223 - 2177927 | 25911.5 |
| putative abc transport system permease protein | SAMN04487832_108174 | Not Available | + | 2177931 - 2181242 | 125031.0 |
| fn3 associated | SAMN04487832_108175 | Not Available | + | 2181567 - 2184209 | 97878.4 |
| flavodoxin | SAMN04487832_108176 | Not Available | + | 2184440 - 2184904 | 16638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.