Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_108147 | Not Available | + | 2148147 - 2149223 | 39252.9 |
| hypothetical protein | SAMN04487832_108148 | Not Available | + | 2149335 - 2149748 | 15752.6 |
| voltage-gated potassium channel | SAMN04487832_108149 | Not Available | + | 2149745 - 2150758 | 38725.8 |
| atp-dependent clp protease adaptor protein clps | SAMN04487832_108150 | Not Available | + | 2150903 - 2151202 | 11299.7 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN04487832_108151 | Not Available | + | 2151204 - 2153447 | 83087.3 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN04487832_108152 | Not Available | + | 2153428 - 2154090 | 25374.2 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487832_108153 | Not Available | + | 2154206 - 2155336 | 42338.4 |
| nicotinamidase-related amidase | SAMN04487832_108154 | Not Available | + | 2155514 - 2156044 | 20384.9 |
| hypothetical protein | SAMN04487832_108155 | Not Available | - | 2156120 - 2157046 | 33391.8 |
| adenosylhomocysteine nucleosidase | SAMN04487832_108156 | Not Available | - | 2157095 - 2157772 | 24622.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.