Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | SAMN04487832_108137 | Not Available | + | 2140599 - 2140901 | 11042.4 |
| nadph-dependent fmn reductase | SAMN04487832_108138 | Not Available | + | 2140901 - 2141590 | 25966.7 |
| nicotinate-nucleotide adenylyltransferase | SAMN04487832_108139 | Not Available | + | 2141603 - 2142808 | 46024.1 |
| transcriptional attenuator, lytr family | SAMN04487832_108140 | Not Available | + | 2142840 - 2144372 | 57570.2 |
| ribosome-associated protein | SAMN04487832_108141 | Not Available | + | 2144377 - 2144733 | 13603.0 |
| small subunit ribosomal protein s21 | SAMN04487832_108142 | Not Available | + | 2145008 - 2145181 | 6692.18 |
| 3-dehydroquinate dehydratase | SAMN04487832_108143 | Not Available | + | 2145321 - 2145752 | 15647.8 |
| xaa-pro aminopeptidase | SAMN04487832_108144 | Not Available | + | 2145763 - 2146830 | 39737.5 |
| elongation factor p | SAMN04487832_108145 | Not Available | + | 2146917 - 2147474 | 20602.5 |
| hypothetical protein | SAMN04487832_108146 | Not Available | + | 2147515 - 2147982 | 17638.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.