Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase, trmh family | SAMN04487832_108127 | Not Available | + | 2126836 - 2127660 | 30103.5 |
| dna processing protein | SAMN04487832_108128 | Not Available | + | 2127682 - 2128962 | 47153.5 |
| dna topoisomerase-1 | SAMN04487832_108129 | Not Available | + | 2128988 - 2131069 | 77506.8 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase | SAMN04487832_108130 | Not Available | + | 2131066 - 2132397 | 48965.7 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04487832_108131 | Not Available | + | 2132378 - 2133388 | 35990.6 |
| ribonuclease-3 | SAMN04487832_108132 | Not Available | + | 2133378 - 2134073 | 26017.0 |
| radical_sam c-terminal domain-containing protein | SAMN04487832_108133 | Not Available | + | 2134060 - 2135058 | 36858.2 |
| condensin subunit smc | SAMN04487832_108134 | Not Available | + | 2135063 - 2138635 | 134144.0 |
| fused signal recognition particle receptor | SAMN04487832_108135 | Not Available | + | 2138704 - 2140026 | 49013.8 |
| xtp/ditp diphosphohydrolase | SAMN04487832_108136 | Not Available | + | 2140016 - 2140588 | 20490.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.