Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04487832_108117 | Not Available | - | 2115819 - 2116463 | 23809.3 |
| gtp pyrophosphokinase | SAMN04487832_108118 | Not Available | - | 2116488 - 2118827 | 89298.6 |
| single-stranded-dna-specific exonuclease | SAMN04487832_108119 | Not Available | - | 2118876 - 2120921 | 74884.8 |
| rna polymerase sporulation-specific sigma factor | SAMN04487832_108120 | Not Available | - | 2121105 - 2121803 | 26319.9 |
| stage ii sporulation protein ga (sporulation sigma-e factor processing peptidase) | SAMN04487832_108121 | Not Available | - | 2121821 - 2122639 | 29632.4 |
| atp-dependent rna helicase dead | SAMN04487832_108122 | Not Available | + | 2122840 - 2124567 | 64427.0 |
| stage ii sporulation protein r | SAMN04487832_108123 | Not Available | + | 2124735 - 2125382 | 24635.4 |
| translation initiation factor if-3 | SAMN04487832_108124 | Not Available | + | 2125568 - 2126092 | 19723.0 |
| large subunit ribosomal protein l35 | SAMN04487832_108125 | Not Available | + | 2126129 - 2126332 | 7495.42 |
| large subunit ribosomal protein l20 | SAMN04487832_108126 | Not Available | + | 2126407 - 2126760 | 13183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.