Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10869 | Not Available | + | 2075895 - 2076311 | 16127.3 |
| 5-methylcytosine-specific restriction enzyme a | SAMN04487832_10870 | Not Available | + | 2076414 - 2076764 | 13305.9 |
| hypothetical protein | SAMN04487832_10871 | Not Available | + | 2076983 - 2077543 | 20669.4 |
| dna modification methylase | SAMN04487832_10872 | Not Available | + | 2077551 - 2078810 | 47048.5 |
| hypothetical protein | SAMN04487832_10873 | Not Available | - | 2078843 - 2079337 | 19020.1 |
| hypothetical protein | SAMN04487832_10874 | Not Available | + | 2079565 - 2080230 | 24889.7 |
| smi1 / knr4 family (sukh-1) | SAMN04487832_108113 | Not Available | - | 2111517 - 2112176 | 25189.8 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04487832_108114 | Not Available | - | 2112428 - 2113786 | 49739.4 |
| hypothetical protein | SAMN04487832_108115 | Not Available | - | 2113846 - 2114292 | 17060.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04487832_108116 | Not Available | - | 2114333 - 2115832 | 56377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.