Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent lon protease | SAMN04487832_10839 | Not Available | + | 2038124 - 2040559 | 92038.1 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN04487832_10840 | Not Available | + | 2040559 - 2043219 | 99700.7 |
| hypothetical protein | SAMN04487832_10841 | Not Available | + | 2043226 - 2043405 | 6894.01 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487832_10842 | Not Available | + | 2043402 - 2044493 | 41174.1 |
| hypothetical protein | SAMN04487832_10843 | Not Available | + | 2044507 - 2045139 | 23818.7 |
| leucine rich repeat-containing protein | SAMN04487832_10844 | Not Available | + | 2045196 - 2046149 | 35264.2 |
| leucine rich repeat-containing protein | SAMN04487832_10845 | Not Available | + | 2046313 - 2049207 | 106028.0 |
| predicted metal-dependent peptidase | SAMN04487832_10846 | Not Available | + | 2049327 - 2050706 | 53515.8 |
| aaa domain (dynein-related subfamily) | SAMN04487832_10847 | Not Available | + | 2050706 - 2052211 | 57181.0 |
| uncharacterized conserved protein, contains parb-like and hnh nuclease domains | SAMN04487832_10848 | Not Available | - | 2053130 - 2054848 | 66556.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.