Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04487832_10768 | Not Available | + | 1883461 - 1884498 | 38942.3 |
| 4-carboxymuconolactone decarboxylase | SAMN04487832_10769 | Not Available | + | 1884516 - 1885271 | 28087.0 |
| hypothetical protein | SAMN04487832_10770 | Not Available | - | 1885347 - 1885763 | 15737.9 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04487832_10771 | Not Available | - | 1885783 - 1887321 | 59486.7 |
| glycerol-3-phosphate acyltransferase plsy | SAMN04487832_10772 | Not Available | - | 1887414 - 1888088 | 24233.7 |
| gtp-binding protein | SAMN04487832_10773 | Not Available | - | 1888088 - 1889416 | 49577.3 |
| hypothetical protein | SAMN04487832_10774 | Not Available | - | 1889440 - 1890177 | 28345.0 |
| putative radical sam enzyme, tigr03279 family | SAMN04487832_10775 | Not Available | - | 1890204 - 1891505 | 49186.9 |
| large subunit ribosomal protein l32 | SAMN04487832_10776 | Not Available | - | 1891583 - 1891768 | 6854.46 |
| uncharacterized protein | SAMN04487832_10777 | Not Available | - | 1891804 - 1892253 | 16632.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.