Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN04487832_10748 | Not Available | - | 1855704 - 1856192 | 18636.5 |
| pp_01527 | SAMN04487832_10749 | Not Available | - | 1856193 - 1857269 | Not Available |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04487832_10750 | Not Available | - | 1857289 - 1857945 | 24909.7 |
| uncharacterized protein yvpb | SAMN04487832_10751 | Not Available | - | 1857935 - 1859122 | 44618.8 |
| predicted nucleotidyltransferase | SAMN04487832_10752 | Not Available | - | 1859126 - 1860325 | 43477.4 |
| acetate kinase | SAMN04487832_10753 | Not Available | + | 1860595 - 1861794 | 43412.0 |
| serine o-acetyltransferase | SAMN04487832_10754 | Not Available | - | 1862221 - 1863189 | 36138.3 |
| terb-c domain-containing protein | SAMN04487832_10755 | Not Available | + | 1863409 - 1864938 | 59324.7 |
| p-loop protein of unknown function | SAMN04487832_10756 | Not Available | + | 1864925 - 1866235 | 49248.1 |
| energy-coupling factor transport system substrate-specific component | SAMN04487832_10757 | Not Available | + | 1866479 - 1867045 | 20787.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.