Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lincosamide and streptogramin a transport system atp-binding/permease protein | SAMN04487832_10738 | Not Available | + | 1843044 - 1844579 | 58333.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-) | SAMN04487832_10739 | Not Available | - | 1844627 - 1845523 | 33170.7 |
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN04487832_10740 | Not Available | - | 1845527 - 1846582 | 39321.5 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN04487832_10741 | Not Available | - | 1846692 - 1848197 | 53428.0 |
| papain family cysteine protease | SAMN04487832_10742 | Not Available | - | 1848819 - 1852061 | 120515.0 |
| hypothetical protein | SAMN04487832_10743 | Not Available | - | 1852096 - 1852350 | 9754.81 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04487832_10744 | Not Available | - | 1852363 - 1853145 | 28713.2 |
| hypothetical protein | SAMN04487832_10745 | Not Available | - | 1853155 - 1854003 | 31611.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04487832_10746 | Not Available | - | 1854135 - 1854974 | 31103.4 |
| trna1(val) a37 n6-methylase trmn6 | SAMN04487832_10747 | Not Available | - | 1854971 - 1855693 | 27225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.