Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10728 | Not Available | - | 1825949 - 1826695 | 25400.8 |
| hypothetical protein | SAMN04487832_10729 | Not Available | + | 1827041 - 1827568 | 19355.2 |
| hypothetical protein | SAMN04487832_10730 | Not Available | + | 1827583 - 1828275 | 25831.0 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN04487832_10731 | Not Available | + | 1828288 - 1829106 | 29752.7 |
| m6 family metalloprotease domain-containing protein | SAMN04487832_10732 | Not Available | + | 1829405 - 1831810 | 90900.1 |
| hypothetical protein | SAMN04487832_10733 | Not Available | - | 1832078 - 1834738 | 97045.0 |
| putative efflux protein, mate family | SAMN04487832_10734 | Not Available | - | 1834980 - 1836350 | 48982.8 |
| arac-type dna-binding protein | SAMN04487832_10735 | Not Available | + | 1836491 - 1837237 | 28827.6 |
| glycosyl hydrolases family 11 | SAMN04487832_10736 | Not Available | + | 1837436 - 1839247 | 67932.4 |
| carbohydrate binding domain-containing protein | SAMN04487832_10737 | Not Available | + | 1839451 - 1842666 | 117991.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.