Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | SAMN04487832_10718 | Not Available | + | 1814412 - 1815746 | 49957.8 |
| cell division protease ftsh | SAMN04487832_10719 | Not Available | + | 1815770 - 1817683 | 70538.9 |
| ph domain-containing protein | SAMN04487832_10720 | Not Available | + | 1817853 - 1818263 | 15998.2 |
| methyltransferase, fkbm family | SAMN04487832_10721 | Not Available | + | 1818282 - 1819349 | 40117.1 |
| nad+ synthase | SAMN04487832_10722 | Not Available | - | 1819439 - 1820191 | 27346.5 |
| nicotinamidase-related amidase | SAMN04487832_10723 | Not Available | - | 1820210 - 1820731 | 18996.1 |
| putative efflux protein, mate family | SAMN04487832_10724 | Not Available | + | 1821131 - 1822528 | 51227.8 |
| amino acid abc transporter substrate-binding protein, paat family (tc 3.a.1.3.-) | SAMN04487832_10725 | Not Available | + | 1822633 - 1823478 | 30781.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_10726 | Not Available | + | 1823629 - 1824579 | 35858.8 |
| hypothetical protein | SAMN04487832_10727 | Not Available | - | 1824701 - 1825804 | 41405.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.