Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_106188 | Not Available | - | 1784270 - 1784839 | 22194.8 |
| surface protein | SAMN04487832_106189 | Not Available | + | 1785016 - 1785708 | 24512.7 |
| integrase core domain-containing protein | SAMN04487832_106190 | Not Available | - | 1785716 - 1785957 | 9138.98 |
| hypothetical protein | SAMN04487832_1071 | Not Available | - | 1785958 - 1786288 | 11358.0 |
| cna protein b-type domain-containing protein | SAMN04487832_1072 | Not Available | - | 1786883 - 1796628 | 347373.0 |
| helix-turn-helix domain-containing protein | SAMN04487832_1073 | Not Available | + | 1797366 - 1797911 | 20652.4 |
| acetyl-coa synthetase | SAMN04487832_1074 | Not Available | + | 1797951 - 1799618 | 63267.3 |
| rna polymerase sigma factor | SAMN04487832_1075 | Not Available | + | 1799828 - 1800550 | 27672.9 |
| hypothetical protein | SAMN04487832_1076 | Not Available | + | 1800547 - 1801644 | 38817.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04487832_1077 | Not Available | + | 1801793 - 1802731 | 33522.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.