Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04487832_106178 | Not Available | + | 1773087 - 1773977 | 31885.7 |
| dihydrodipicolinate reductase | SAMN04487832_106179 | Not Available | + | 1774032 - 1774787 | 27491.9 |
| diaminopimelate dehydrogenase | SAMN04487832_106180 | Not Available | + | 1774866 - 1775855 | 36431.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487832_106181 | Not Available | - | 1776093 - 1776824 | 27733.4 |
| cohesin domain-containing protein | SAMN04487832_106182 | Not Available | - | 1776985 - 1777917 | 32491.4 |
| uncharacterized protein | SAMN04487832_106183 | Not Available | + | 1778231 - 1778737 | 19800.1 |
| o-acetylhomoserine (thiol)-lyase | SAMN04487832_106184 | Not Available | + | 1778760 - 1780025 | 45705.5 |
| protoporphyrinogen ix oxidase, menaquinone-dependent (flavodoxin domain) | SAMN04487832_106185 | Not Available | + | 1780030 - 1780560 | 19576.4 |
| leucine rich repeat-containing protein | SAMN04487832_106186 | Not Available | - | 1780666 - 1781787 | 39998.8 |
| hypothetical protein | SAMN04487832_106187 | Not Available | - | 1782085 - 1784301 | 83071.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.