Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | SAMN04487832_106156 | Not Available | + | 1754547 - 1755884 | 49294.2 |
| alpha-ribazole phosphatase | SAMN04487832_106157 | Not Available | + | 1755881 - 1756435 | 20928.8 |
| adenosylcobinamide-phosphate synthase | SAMN04487832_106158 | Not Available | + | 1756438 - 1757403 | 34976.2 |
| l-threonine o-3-phosphate decarboxylase | SAMN04487832_106159 | Not Available | + | 1757400 - 1758434 | 38171.8 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN04487832_106160 | Not Available | + | 1758427 - 1759893 | 52877.6 |
| precorrin-8x methylmutase | SAMN04487832_106161 | Not Available | + | 1759890 - 1760528 | 22867.6 |
| sirohydrochlorin cobaltochelatase | SAMN04487832_106163 | Not Available | + | 1760949 - 1762013 | 38693.4 |
| hypothetical protein | SAMN04487832_106164 | Not Available | + | 1762070 - 1763011 | 33460.2 |
| iron complex transport system substrate-binding protein | SAMN04487832_106165 | Not Available | + | 1763004 - 1764134 | 41817.3 |
| iron complex transport system permease protein | SAMN04487832_106166 | Not Available | + | 1764143 - 1765159 | 35565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.