Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487832_106146 | Not Available | - | 1743402 - 1744034 | 23327.1 |
| transcriptional regulator, tetr family | SAMN04487832_106147 | Not Available | + | 1744173 - 1744745 | 21515.2 |
| nicotinamidase-related amidase | SAMN04487832_106148 | Not Available | + | 1744760 - 1745275 | 19262.2 |
| pectate lyase | SAMN04487832_106149 | Not Available | - | 1745335 - 1748745 | 123326.0 |
| cobalt-precorrin 5b c1-methyltransferase | SAMN04487832_106150 | Not Available | + | 1748981 - 1750108 | 40316.6 |
| cobalt-precorrin 4 c11-methyltransferase | SAMN04487832_106151 | Not Available | + | 1750110 - 1750868 | 27420.6 |
| cobalt-precorrin 5a acetaldehyde-lyase | SAMN04487832_106152 | Not Available | + | 1750865 - 1751899 | 36759.1 |
| precorrin-3b c17-methyltransferase | SAMN04487832_106153 | Not Available | + | 1751896 - 1752621 | 26189.1 |
| precorrin-6a/cobalt-precorrin-6a reductase | SAMN04487832_106154 | Not Available | + | 1752614 - 1753363 | 27351.7 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN04487832_106155 | Not Available | + | 1753360 - 1754550 | 42637.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.