Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04487832_106126 | Not Available | - | 1729406 - 1730548 | 41694.4 |
| phosphatidate cytidylyltransferase | SAMN04487832_106127 | Not Available | - | 1730657 - 1731526 | 31373.4 |
| undecaprenyl diphosphate synthase | SAMN04487832_106128 | Not Available | - | 1731526 - 1732266 | 28142.4 |
| ribosome recycling factor | SAMN04487832_106129 | Not Available | - | 1732276 - 1732830 | 20594.9 |
| uridylate kinase | SAMN04487832_106130 | Not Available | - | 1732865 - 1733572 | 25425.6 |
| Trna-ser | Not Available | Not Available | + | 1733856 - 1733944 | Not Available |
| Trna-ser | Not Available | Not Available | + | 1733990 - 1734079 | Not Available |
| glycerol-3-phosphate acyltransferase plsy | SAMN04487832_106133 | Not Available | + | 1734161 - 1734793 | 22858.6 |
| hypothetical protein | SAMN04487832_106134 | Not Available | - | 1734897 - 1736054 | 42473.1 |
| sigma-70 region 2 | SAMN04487832_106135 | Not Available | - | 1736066 - 1736629 | 21283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.