Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | SAMN04487832_106116 | Not Available | - | 1716783 - 1717376 | 21368.6 |
| histidinol-phosphate aminotransferase | SAMN04487832_106117 | Not Available | - | 1717369 - 1718436 | 40920.8 |
| hypothetical protein | SAMN04487832_106118 | Not Available | - | 1718461 - 1718769 | 11678.9 |
| histidinol dehydrogenase | SAMN04487832_106119 | Not Available | - | 1718771 - 1720057 | 46535.6 |
| atp phosphoribosyltransferase | SAMN04487832_106120 | Not Available | - | 1720057 - 1720686 | 23056.5 |
| atp phosphoribosyltransferase regulatory subunit | SAMN04487832_106121 | Not Available | - | 1720683 - 1721879 | 44599.5 |
| dna polymerase-3 subunit alpha | SAMN04487832_106122 | Not Available | - | 1721971 - 1726305 | 162271.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04487832_106123 | Not Available | - | 1726309 - 1727346 | 36887.9 |
| ribonuclease z | SAMN04487832_106124 | Not Available | - | 1727380 - 1728294 | 33649.8 |
| regulator of sigma e protease | SAMN04487832_106125 | Not Available | - | 1728296 - 1729354 | 38589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.