Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| giy-yig catalytic domain-containing protein | SAMN04487832_106106 | Not Available | - | 1711526 - 1711774 | 9409.92 |
| phosphoribosyl-atp pyrophosphatase | SAMN04487832_106107 | Not Available | - | 1711938 - 1712276 | 12968.3 |
| phosphoribosyl-amp cyclohydrolase | SAMN04487832_106108 | Not Available | - | 1712280 - 1712624 | 13174.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487832_106109 | Not Available | - | 1712634 - 1713035 | 15641.6 |
| cytidine deaminase | SAMN04487832_106110 | Not Available | - | 1713028 - 1713429 | 14813.9 |
| cyclase | SAMN04487832_106111 | Not Available | - | 1713435 - 1714190 | 27013.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04487832_106112 | Not Available | - | 1714400 - 1715125 | 26291.6 |
| protein tyrosine/serine phosphatase | SAMN04487832_106113 | Not Available | - | 1715138 - 1715824 | 25474.3 |
| hypothetical protein | SAMN04487832_106114 | Not Available | - | 1715907 - 1716143 | 8601.08 |
| glutamine amidotransferase | SAMN04487832_106115 | Not Available | - | 1716178 - 1716783 | 21831.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.