Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10676 | Not Available | + | 1679580 - 1680368 | 29914.4 |
| holin-like protein | SAMN04487832_10677 | Not Available | + | 1680381 - 1680737 | 13163.8 |
| tigr00659 family protein | SAMN04487832_10678 | Not Available | + | 1680734 - 1681426 | 24875.4 |
| thymidylate kinase | SAMN04487832_10679 | Not Available | + | 1681525 - 1682190 | 25296.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04487832_10680 | Not Available | + | 1682512 - 1683333 | 31010.1 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04487832_10681 | Not Available | - | 1683440 - 1683910 | 17049.6 |
| hypothetical protein | SAMN04487832_10682 | Not Available | - | 1683959 - 1684501 | 19681.6 |
| lysophospholipase l1 | SAMN04487832_10683 | Not Available | - | 1684593 - 1686302 | 61299.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_10684 | Not Available | - | 1686327 - 1688012 | 64903.9 |
| spermidine synthase | SAMN04487832_10685 | Not Available | + | 1688245 - 1689864 | 59330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.