Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04487832_10666 | Not Available | - | 1666472 - 1667215 | 26855.3 |
| multimeric flavodoxin wrba | SAMN04487832_10667 | Not Available | + | 1667448 - 1668065 | 22342.7 |
| hypothetical protein | SAMN04487832_10668 | Not Available | + | 1668162 - 1668611 | 16797.0 |
| phenylalanyl-trna synthetase alpha chain | SAMN04487832_10669 | Not Available | + | 1668826 - 1669863 | 38809.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN04487832_10670 | Not Available | + | 1669876 - 1672314 | 91249.7 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN04487832_10671 | Not Available | + | 1672478 - 1674394 | 70910.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487832_10672 | Not Available | - | 1674427 - 1675164 | 26991.8 |
| arabinogalactan endo-1,4-beta-galactosidase | SAMN04487832_10673 | Not Available | + | 1675346 - 1676806 | 55159.3 |
| ssu ribosomal protein s15p | SAMN04487832_10674 | Not Available | + | 1676974 - 1677240 | 10245.6 |
| polyribonucleotide nucleotidyltransferase | SAMN04487832_10675 | Not Available | + | 1677405 - 1679519 | 77090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.