Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487832_10646 | Not Available | - | 1639929 - 1640591 | 25035.5 |
| anaerobic ribonucleoside-triphosphate reductase | SAMN04487832_10647 | Not Available | + | 1640702 - 1640965 | 10189.1 |
| rubrerythrin | SAMN04487832_10648 | Not Available | + | 1641031 - 1641582 | 20014.7 |
| two component transcriptional regulator, luxr family | SAMN04487832_10649 | Not Available | - | 1641639 - 1642265 | 23189.2 |
| histidine kinase | SAMN04487832_10650 | Not Available | - | 1642262 - 1643872 | 60192.8 |
| energy-coupling factor transport system substrate-specific component | SAMN04487832_10651 | Not Available | - | 1643968 - 1644654 | 25213.0 |
| energy-coupling factor transport system atp-binding protein | SAMN04487832_10652 | Not Available | - | 1644651 - 1646282 | 60885.9 |
| energy-coupling factor transport system permease protein | SAMN04487832_10653 | Not Available | - | 1646255 - 1647133 | 33270.3 |
| squalene-hopene cyclase c-terminal domain-containing protein | SAMN04487832_10654 | Not Available | - | 1647135 - 1648940 | 64749.4 |
| hypothetical protein | SAMN04487832_10655 | Not Available | - | 1649002 - 1649961 | 33673.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.