Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10636 | Not Available | + | 1627032 - 1627367 | 12551.3 |
| exodeoxyribonuclease v alpha subunit | SAMN04487832_10637 | Not Available | + | 1627419 - 1629662 | 84064.1 |
| rod shape-determining protein mreb | SAMN04487832_10638 | Not Available | + | 1629692 - 1630711 | 36551.7 |
| dna polymerase v | SAMN04487832_10639 | Not Available | + | 1630842 - 1632359 | 57436.3 |
| putative efflux protein, mate family | SAMN04487832_10640 | Not Available | + | 1632490 - 1633878 | 49700.8 |
| nad+ diphosphatase | SAMN04487832_10641 | Not Available | + | 1633883 - 1634713 | 31844.9 |
| hd domain-containing protein | SAMN04487832_10642 | Not Available | - | 1634778 - 1636955 | 80384.2 |
| uncharacterized protein family (upf0051) | SAMN04487832_10643 | Not Available | - | 1637217 - 1638143 | 33510.7 |
| fe-s cluster assembly atp-binding protein | SAMN04487832_10644 | Not Available | - | 1638158 - 1638886 | 26497.1 |
| undecaprenyl-diphosphatase | SAMN04487832_10645 | Not Available | - | 1639029 - 1639877 | 31262.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.