Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | SAMN04487832_10626 | Not Available | - | 1612872 - 1614851 | 75328.9 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN04487832_10627 | Not Available | - | 1615028 - 1616866 | 67503.7 |
| hypothetical protein | SAMN04487832_10628 | Not Available | - | 1616994 - 1618427 | 53265.4 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN04487832_10629 | Not Available | - | 1618486 - 1619868 | 49188.2 |
| transcriptional regulator, spx/mgsr family | SAMN04487832_10630 | Not Available | - | 1620041 - 1620382 | 13189.8 |
| beta-glucosidase | SAMN04487832_10631 | Not Available | - | 1620384 - 1623161 | 102042.0 |
| protein of unknown function | SAMN04487832_10632 | Not Available | - | 1623272 - 1623817 | 20855.1 |
| hypothetical protein | SAMN04487832_10633 | Not Available | - | 1623820 - 1624107 | 10593.0 |
| ig-like domain (group 2) | SAMN04487832_10634 | Not Available | + | 1624483 - 1625502 | 37344.0 |
| putative efflux protein, mate family | SAMN04487832_10635 | Not Available | + | 1625569 - 1626939 | 49011.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.