Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yjjp, duf1212 family | SAMN04487832_10616 | Not Available | + | 1600290 - 1601612 | 47627.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_10617 | Not Available | + | 1602022 - 1602576 | 21548.6 |
| hypothetical protein | SAMN04487832_10618 | Not Available | + | 1602563 - 1603960 | 51056.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_10619 | Not Available | + | 1604145 - 1606070 | 72038.2 |
| glutamine synthetase | SAMN04487832_10620 | Not Available | + | 1606108 - 1608201 | 78709.6 |
| hypothetical protein | SAMN04487832_10621 | Not Available | - | 1608235 - 1609131 | 34802.1 |
| transcription elongation factor grea | SAMN04487832_10622 | Not Available | - | 1609180 - 1609647 | 17306.6 |
| hypothetical protein | SAMN04487832_10623 | Not Available | - | 1609811 - 1610044 | 8912.46 |
| dna gyrase subunit a | SAMN04487832_10624 | Not Available | - | 1610144 - 1612384 | 85002.4 |
| ribosomal protein s18 acetylase rimi | SAMN04487832_10625 | Not Available | - | 1612407 - 1612865 | 17128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.