Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate permease, sulp family | SAMN04487832_1066 | Not Available | + | 1582093 - 1583775 | 59929.9 |
| leucine rich repeat-containing protein | SAMN04487832_1067 | Not Available | + | 1584013 - 1590342 | 229353.0 |
| aspartate carbamoyltransferase | SAMN04487832_1068 | Not Available | - | 1590413 - 1591495 | 40602.0 |
| hypothetical protein | SAMN04487832_1069 | Not Available | - | 1591533 - 1592201 | 25038.2 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04487832_10610 | Not Available | - | 1592225 - 1594096 | 71207.0 |
| moxr-like atpase | SAMN04487832_10611 | Not Available | + | 1594337 - 1595287 | 34936.2 |
| protein of unknown function duf58 | SAMN04487832_10612 | Not Available | + | 1595297 - 1596490 | 45239.8 |
| transglutaminase-like superfamily protein | SAMN04487832_10613 | Not Available | + | 1596509 - 1599274 | 103768.0 |
| hypothetical protein | SAMN04487832_10614 | Not Available | + | 1599285 - 1599851 | 20559.3 |
| hypothetical protein | SAMN04487832_10615 | Not Available | - | 1599895 - 1600125 | 8467.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.