Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | SAMN04487832_105150 | Not Available | + | 1527767 - 1530307 | 96634.9 |
| hypothetical protein | SAMN04487832_105151 | Not Available | + | 1530321 - 1530752 | 15339.6 |
| hypothetical protein | SAMN04487832_105152 | Not Available | + | 1530815 - 1531297 | 17114.1 |
| hypothetical protein | SAMN04487832_105153 | Not Available | + | 1531315 - 1532478 | 43510.2 |
| prgi family protein | SAMN04487832_105154 | Not Available | + | 1532653 - 1532901 | 9849.74 |
| type iv secretory pathway, virb4 component | SAMN04487832_105155 | Not Available | + | 1532907 - 1535384 | 94751.9 |
| hypothetical protein | SAMN04487832_105156 | Not Available | + | 1535421 - 1536749 | 50768.5 |
| hypothetical protein | SAMN04487832_105157 | Not Available | + | 1536765 - 1537085 | 12140.7 |
| hypothetical protein | SAMN04487832_105158 | Not Available | + | 1537085 - 1539226 | 79163.1 |
| hypothetical protein | SAMN04487832_105159 | Not Available | + | 1539219 - 1539578 | 13997.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.