Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory pathway, virb4 component | SAMN04487832_105130 | Not Available | - | 1507627 - 1510011 | 90497.9 |
| prgi family protein | SAMN04487832_105131 | Not Available | - | 1510156 - 1510560 | 16007.7 |
| hypothetical protein | SAMN04487832_105132 | Not Available | - | 1510573 - 1511361 | 28763.7 |
| hypothetical protein | SAMN04487832_105133 | Not Available | - | 1511429 - 1511851 | 15392.9 |
| type iv secretion system protein vird4 | SAMN04487832_105134 | Not Available | - | 1511873 - 1514113 | 83472.6 |
| hypothetical protein | SAMN04487832_105135 | Not Available | - | 1514110 - 1515483 | 51583.8 |
| sigma-70, region 4 | SAMN04487832_105136 | Not Available | - | 1515634 - 1516149 | 20501.3 |
| tetratricopeptide repeat-containing protein | SAMN04487832_105137 | Not Available | - | 1516473 - 1519538 | 118239.0 |
| site-specific recombinase xerd | SAMN04487832_105138 | Not Available | + | 1520059 - 1521039 | 37506.9 |
| cellulose biosynthesis protein bcsq | SAMN04487832_105139 | Not Available | + | 1521166 - 1521834 | 25413.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.