Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04487832_105110 | Not Available | - | 1476988 - 1478025 | 38868.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04487832_105111 | Not Available | - | 1478030 - 1479541 | 56258.2 |
| tupa-like atpgrasp | SAMN04487832_105112 | Not Available | - | 1479970 - 1480935 | 37731.8 |
| protein of unknown function | SAMN04487832_105113 | Not Available | - | 1481155 - 1481619 | 17896.8 |
| epsg family protein | SAMN04487832_105114 | Not Available | - | 1481634 - 1482761 | 43521.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487832_105115 | Not Available | - | 1482765 - 1483859 | 41608.3 |
| glycosyl transferase family 2 | SAMN04487832_105116 | Not Available | - | 1483861 - 1484682 | 31565.5 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | SAMN04487832_105117 | Not Available | - | 1484687 - 1486111 | 54566.2 |
| site-specific recombinase xerd | SAMN04487832_105118 | Not Available | + | 1486581 - 1487672 | 41799.1 |
| hypothetical protein | SAMN04487832_105119 | Not Available | - | 1487819 - 1488031 | 7930.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.