Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_105100 | Not Available | + | 1463457 - 1463666 | 8015.38 |
| single-strand binding protein family protein | SAMN04487832_105101 | Not Available | + | 1463682 - 1464011 | 12248.7 |
| phage integrase family protein | SAMN04487832_105102 | Not Available | + | 1464384 - 1465172 | 30078.6 |
| pld-like domain-containing protein | SAMN04487832_105103 | Not Available | + | 1465201 - 1467867 | 103432.0 |
| hypothetical protein | SAMN04487832_105104 | Not Available | + | 1467880 - 1471200 | 127006.0 |
| hypothetical protein | SAMN04487832_105105 | Not Available | - | 1471340 - 1471678 | 12830.8 |
| helicase associated domain-containing protein | SAMN04487832_105106 | Not Available | - | 1471705 - 1473372 | 65528.1 |
| protein-tyrosine phosphatase | SAMN04487832_105107 | Not Available | - | 1473461 - 1474150 | 26732.8 |
| capsular exopolysaccharide family | SAMN04487832_105108 | Not Available | - | 1474140 - 1475660 | 55925.2 |
| udpglucose 6-dehydrogenase | SAMN04487832_105109 | Not Available | - | 1475755 - 1476987 | 45976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.