Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10590 | Not Available | - | 1453009 - 1453437 | 16660.5 |
| hypothetical protein | SAMN04487832_10591 | Not Available | - | 1453452 - 1454318 | 33927.6 |
| hypothetical protein | SAMN04487832_10592 | Not Available | - | 1454345 - 1455286 | 37726.8 |
| hypothetical protein | SAMN04487832_10593 | Not Available | - | 1455538 - 1455750 | 7811.25 |
| hypothetical protein | SAMN04487832_10594 | Not Available | - | 1455791 - 1457059 | 48898.1 |
| hypothetical protein | SAMN04487832_10595 | Not Available | - | 1457302 - 1457796 | 19565.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04487832_10596 | Not Available | - | 1457851 - 1458909 | 40974.4 |
| putative transposase | SAMN04487832_10597 | Not Available | - | 1459124 - 1459591 | 18359.3 |
| flavodoxin-like fold | SAMN04487832_10598 | Not Available | + | 1460026 - 1460715 | 25778.3 |
| wobble nucleotide-excising trnase | SAMN04487832_10599 | Not Available | - | 1460785 - 1463148 | 91104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.