Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | SAMN04487832_10560 | Not Available | - | 1423868 - 1424569 | 26748.7 |
| hypothetical protein | SAMN04487832_10561 | Not Available | - | 1424585 - 1425121 | 21987.9 |
| hypothetical protein | SAMN04487832_10562 | Not Available | - | 1425313 - 1427382 | 81987.1 |
| dna binding domain-containing protein, excisionase family | SAMN04487832_10563 | Not Available | + | 1427614 - 1427829 | 7725.41 |
| ap2-like dna-binding integrase domain-containing protein | SAMN04487832_10564 | Not Available | + | 1427822 - 1429024 | 45512.6 |
| d5 n terminal like | SAMN04487832_10565 | Not Available | + | 1429064 - 1430437 | 51615.2 |
| hypothetical protein | SAMN04487832_10566 | Not Available | + | 1430585 - 1431127 | 20404.2 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04487832_10567 | Not Available | + | 1431124 - 1432218 | 41698.5 |
| site-specific dna recombinase | SAMN04487832_10568 | Not Available | - | 1432549 - 1434168 | 62310.6 |
| hypothetical protein | SAMN04487832_10569 | Not Available | - | 1434255 - 1434422 | 6059.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.