Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_1012 | Not Available | + | 3164 - 3523 | 14259.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04487832_1013 | Not Available | + | 3520 - 4158 | 23887.9 |
| secondary thiamine-phosphate synthase enzyme | SAMN04487832_1014 | Not Available | + | 4172 - 4567 | 14097.6 |
| nad-dependent deacetylase | SAMN04487832_1015 | Not Available | + | 4571 - 5284 | 26472.5 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN04487832_1016 | Not Available | - | 5662 - 6519 | 30405.2 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN04487832_1017 | Not Available | - | 6534 - 7862 | 49070.8 |
| predicted zn-dependent peptidase | SAMN04487832_1018 | Not Available | - | 7859 - 9142 | 48445.2 |
| peptidase m16 inactive domain-containing protein | SAMN04487832_1019 | Not Available | - | 9144 - 10406 | 47601.3 |
| rubredoxin-nad+ reductase | SAMN04487832_10110 | Not Available | - | 10677 - 10832 | 5672.43 |
| macrophage migration inhibitory factor (mif) | SAMN04487832_10111 | Not Available | - | 10890 - 11231 | 12326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.