Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilisation nuclease domain-containing protein | SAMN04487832_10550 | Not Available | - | 1416409 - 1417017 | 22723.6 |
| hypothetical protein | SAMN04487832_10551 | Not Available | - | 1416987 - 1417271 | 10615.8 |
| protein of unknown function | SAMN04487832_10552 | Not Available | - | 1417579 - 1418196 | 23023.4 |
| protein of unknown function | SAMN04487832_10553 | Not Available | - | 1418189 - 1418506 | 12631.3 |
| hypothetical protein | SAMN04487832_10554 | Not Available | + | 1419209 - 1419457 | 8686.3 |
| putative amidoligase enzyme | SAMN04487832_10555 | Not Available | + | 1419515 - 1420612 | 42305.9 |
| hypothetical protein | SAMN04487832_10556 | Not Available | + | 1420624 - 1420791 | 6545.08 |
| glutamine amidotransferase domain-containing protein | SAMN04487832_10557 | Not Available | + | 1420805 - 1421779 | 37052.8 |
| site-specific dna recombinase | SAMN04487832_10558 | Not Available | + | 1421904 - 1422545 | 24715.9 |
| site-specific recombinase xerd | SAMN04487832_10559 | Not Available | + | 1422529 - 1423707 | 45110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.